This is a list of long noncoding RNA databases, which provide information about lncRNAs.
Long non-coding RNA databases Name Description ReferencesdeepBaseIdentification, expression, evolution and function of long non-coding RNAs (LncRNAs), small RNAs and circular RNAs from deep-sequencing data LNCipediaA comprehensive compendium of human long non-coding RNAs. lncRNAdbThe Reference Database For Functional Long Noncoding RNAs. LncRNAWiki A wiki-based, publicly editable and open-content platform for community curation of human long non-coding RNAs (lncRNAs) LncBookA comprehensive collection of 270,044 human lncRNAs and systematic curation of lncRNAs’ annotation by multi-omics data integration, function annotation and disease association MONOCLdbThe MOuse NOnCode Lung database provides the annotations and expression profiles of mouse long non-coding RNAs (lncRNAs) involved in influenza and SARS-CoV infections. NONCODEAn integrated knowledge database dedicated to ncRNAs, especially lncRNAs lncRNomeA comprehensive searchable biologically oriented knowledgebase for long noncoding RNAs in Humans. NREDA database of long noncoding RNA expression. C-It-Loci A tool to explore and to compare the expression profiles of conserved loci among various tissues in three organisms MiTranscriptomeA catalog of human long poly-adenylated RNA transcripts derived from computational analysis of high-throughput RNA-Seq data from over 6,500 samples, spanning diverse cancer and tissue typesslncky Evolution BrowserThis site contains alignments and evolutionary metrics of conserved lncRNAs.Cancer LncRNA Census (CLC)Database of long-noncoding RNAs causally implicated in cancer through in vivo, in vitro and other evidence.BIGTranscriptomeHigh-confidence of coding and noncoding transcriptomes assembled with hundreds of pseudo-stranded and stranded RNA-seq datasets. lncRNAKBA knowledgebase of tissue-specific functional annotation and trait association of long noncoding RNAlncHUB2Functional predictions of human and mouse long non-coding RNAs based on lncRNA-gene co-expression correlations.
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