The Nandi Awards for the year 1999 were announced by Andhra Pradesh Government at a news conference in Hyderabad. Kalisundam Raa, starring Venkatesh, won the best film award followed by Nee Kosam and Prema Katha. Venkatesh won best actor award for Kalisundham Raa, Maheswari won the best actress award for Nee Kosam, and Ramgopal Varma won the best director award for Prema Katha.

1999 Nandi Awards Winners List Category Winner Film Best Feature Film Kalisundam Raa Kalisundam RaaSecond Best Feature Film Nee KosamNee Kosam Third Best Feature Film Prema Katha Prema Katha Best ActorVenkateshkalisundam Raa Best ActressMaheswariNee Kosam Best DirectorRam Gopal Varma Prema Katha Nandi Award for Best Director for (Best Film/Producer) D.Suresh Babukalisundam Raa Best Music DirectorVandemataram SrinivasSwayamvaram Best Male Playback Singer Hariharan Annayya Best Female Playback Singer ChithraSwayamvaram Best Story WriterDinraj Uday Shankar kalisundam Raa Best Supporting ActorK Viswanath kalisundam Raa Best Supporting ActressRadhikaPrema Katha Best Character ActorMallikarjuna RaoThammudu Nandi Award for Best Character ActressNirmalammaSeetharama Raju Best Child ActorMahendraDevi Best Child Actress Best Cinematographer Venkata Prasad Prema Katha Best Screenplay WriterSrinu VaitlaNee Kosam Best Dialogue Writer L.B. Sri RamRamasakkanodu Best Lyricist Sirivennela SitaramasastriPrema Katha Best Art DirectorSreenivasa Raju Rajakumarudu Best First Film of a Director Srinu VaitlaNee Kosam Best AudiographerMadhusudhana Reddy Samudram Best EditorShankar Samudram Best Male Comedian M. S. NarayanaRamasakkanodu Best Female ComedianSri LakshmiPolice Best VillainTanikella BharaniSamudram ChoreographeLawrenceAnnayya Best Film Critic on Telugu CinemaVaasiraju Prakasam Best Fight MasterKanal KannanAnnayya Special Jury AwardVenuSwayamvaram Special Jury AwardSrihari Police / Nandi Award for Akkineni Award for best home-viewing feature filmRaja KumaruduRaja KumaruduSarojini Devi Award for a Film on National IntegrationBharatha Ratna Bharatha Ratna Best Documentary FilmSurabhiSurabhiSecond Best Documentary Film Amma Kani O AmmaAmma Kani O AmmaBest Children's Film Pathanamlo Pasi Vaadu Pathanamlo Pasi VaaduSecond Best Children's Film

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